The Center for Systems and Computational Biology has a range of high performance computing resources available to the Institute community:

CSCB Cluster (Coming Summer 2012)

120 Cores, Intel Xeon X5650 2.66 GHz
960 GB Memory
1TB scratch disk storage per node
Rocks Cluster OS (Red Hat Enterprise Linux 5 Compatible)

CSCB Compute

12 Cores, Intel Xeon X5670 2.93 GHz
96 GB Ram
1.5 TB scratch disk storage
Red Hat Enterprise Linux 5 OS

Software List

Matlab
R
bam2fastq-1.1.0
BEDTools-2.13.3
boost-1.46.1
boost-1.48.0
bowtie-0.12.7
bowtie2-2.0.0-beta5
bwa-0.5.9
cufflinks-1.0.0
cufflinks-1.3.0
gnuplot-4.4.4
libgtextutils-0.6
mosaik-aligner-1.1.0018
picard-tools-1.47
python-2.7.1
R-2.14.1
RepeatMasker
rmblast-1.2-ncbi-blast-2.2.23+
samtools-0.1.16
samtools-0.1.18
stampy-1.0.13
tophat-1.3.2
tophat-1.3.3
tophat-1.4.0
trf-404